Crop SNPdb Data Download

Download genotype matrices for all canola and wheat samples in the database by chromosome.


Brassica chromosome size and SNP number shown for B. napus (A and C genomes) and B. juncea (B genome).

Brassica 60k bulk download
Wheat 90k bulk download
Chr Size (Mb) SNP# B.napus B.juncea B.rapa B.oleracea Chr Size (Mb) SNP# T.aestivum
A01 31.16 2061


- 1A
594.10 3439
A02
31.34 1699


- 1B
689.85 4072
A03
39.49 2878


- 1D
495.45 2979
A04
23.31 2056


- 2A
780.80 4166
A05
28.60 2102


- 2B
801.26 5839
A06
31.90 1977


- 2D
651.85 3526
A07
28.90 2422


- 3A
750.84 3317
A08
21.74 1364


- 3B
830.83 3795
A09
46.72 2406


- 3D
615.55 2549
A10
19.96 2078


- 4A
744.59 3048
C01
47.95 3595
- -
4B
673.62 2717
C02
58.66 3571
- -
4D
509.86 1849
C03
71.85 3659
- -
5A
709.77 3575
C04
61.04 4630
- -
5B
713.15 4349
C05
52.72 1427
- -
5D
566.08 2940
C06
44.61 1960
- -
6A
618.08 3226
C07
52.50 2594
- -
6B
720.99 3513
C08
46.29 1947
- -
6D
473.59 2280
C09
60.21 1473
- -
7A
736.71 3766
B01
45.93 324 -
- - 7B
750.62 3338
B02 67.31 415 -
- - 7D
638.69 2815
B03 58.66 435 -
- - Pan
365.49 626
B04 43.48 209 -
- - Unplaced 480.98 873
B05 64.15 339 -
- -
B06 36.77 319 -
- -
B07 43.07 262 -
- -
B08 69.94 306 -
- -
Unplaced 51.33 1057